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One or more keywords matched the following properties of Pamer, Eric
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overview Humans and other mammals are colonized by complex populations of microbes that constitute the microbiota. Some commensal bacteria enhance immune defenses by inducing host expression of antimicrobial factors while others secrete antimicrobial molecules that inhibit pathogens. We study interactions between pathogenic and beneficial bacteria and their mammalian hosts. Our laboratory’s research focuses on a wide range of commensal bacteria that have been characterized at the genomic, proteomic and metabolomic level and we are using gnotobiotic mice to test assembled commensal consortia for their ability to enhance resistance against pathogenic bacteria. Using these platforms, we have identified multiple novel mechanisms of antimicrobial resistance that can be exploited to reduce the risk of infection by highly antibiotic-resistant pathogens. Our laboratory has worked closely with clinical groups to investigate the role of the microbiota in clinical outcomes. We have demonstrated that loss of microbiota diversity during allogeneic hematopoietic cell transplantation adversely impacts outcomes and have investigated the impact of microbiota composition on the risk of developing colitis during checkpoint blockade cancer immunotherapy.
One or more keywords matched the following items that are connected to Pamer, Eric
Item TypeName
Concept Bacteria
Concept Gram-Positive Bacteria
Concept Gram-Negative Bacteria
Concept Antibiotic Prophylaxis
Concept Anti-Bacterial Agents
Academic Article Rapid fucosylation of intestinal epithelium sustains host-commensal symbiosis in sickness.
Academic Article Genome-Wide Screening for Enteric Colonization Factors in Carbapenem-Resistant ST258 Klebsiella pneumoniae.
Academic Article Familial transmission rather than defective innate immunity shapes the distinct intestinal microbiota of TLR-deficient mice.
Academic Article Immune responses to commensal and environmental microbes.
Academic Article Vancomycin-resistant enterococci exploit antibiotic-induced innate immune deficits.
Academic Article Prevention of peritransplantation viridans streptococcal bacteremia with early vancomycin administration: a single-center observational cohort study.
Academic Article Reconstitution of the gut microbiota of antibiotic-treated patients by autologous fecal microbiota transplant.
Academic Article Voriconazole inhibits fungal growth without impairing antigen presentation or T-cell activation.
Academic Article The intestinal microbiota: Antibiotics, colonization resistance, and enteric pathogens.
Academic Article Innate immune signaling in defense against intestinal microbes.
Academic Article Enlisting commensal microbes to resist antibiotic-resistant pathogens.
Academic Article Antibiotics, microbiota, and immune defense.
Academic Article Antibiotic-Induced Changes in the Intestinal Microbiota and Disease.
Academic Article Influence of Minimum Inhibitory Concentration in Clinical Outcomes of Enterococcus faecium Bacteremia Treated With Daptomycin: Is it Time to Change the Breakpoint?
Academic Article Gut microbiota dysbiosis and diarrhea in kidney transplant recipients.
Academic Article Precision microbiome reconstitution restores bile acid mediated resistance to Clostridium difficile.
Academic Article Intestinal Bile Acids Induce a Morphotype Switch in Vancomycin-Resistant Enterococcus that Facilitates Intestinal Colonization.
Academic Article The oral microbiota in patients with pancreatic cancer, patients with IPMNs, and controls: a pilot study.
Academic Article Commensal bacteria mediated defenses against pathogens.
Academic Article Loss of Microbiota-Mediated Colonization Resistance to Clostridium difficile Infection With Oral Vancomycin Compared With Metronidazole.
Academic Article Bacterial flagellin stimulates Toll-like receptor 5-dependent defense against vancomycin-resistant Enterococcus infection.
Academic Article Toll-like receptor 4 polymorphisms and risk of gram-negative bacteremia after allogeneic stem cell transplantation. A prospective pilot study.
Academic Article The effects of amine-modified single-walled carbon nanotubes on the mouse microbiota.
Academic Article TLR-7 activation enhances IL-22-mediated colonization resistance against vancomycin-resistant enterococcus.
Academic Article Distinct but Spatially Overlapping Intestinal Niches for Vancomycin-Resistant Enterococcus faecium and Carbapenem-Resistant Klebsiella pneumoniae.
Academic Article Microbiota Disruption Induced by Early Use of Broad-Spectrum Antibiotics Is an Independent Risk Factor of Outcome after Allogeneic Stem Cell Transplantation.
Academic Article Microbiota-mediated colonization resistance against intestinal pathogens.
Academic Article Intestinal Blautia Is Associated with Reduced Death from Graft-versus-Host Disease.
Academic Article Clostridium difficile colitis: pathogenesis and host defence.
Academic Article Microbiome mediation of infections in the cancer setting.
Academic Article Commensal microbiota affects ischemic stroke outcome by regulating intestinal ?d T cells.
Academic Article The effects of intestinal tract bacterial diversity on mortality following allogeneic hematopoietic stem cell transplantation.
Academic Article Role of intestinal microbiota in transplantation outcomes.
Academic Article Commensal microbes provide first line defense against Listeria monocytogenes infection.
Academic Article Cooperating Commensals Restore Colonization Resistance to Vancomycin-Resistant Enterococcus faecium.
Academic Article Breakthrough trichosporonosis in a bone marrow transplant recipient receiving caspofungin acetate.
Academic Article Inhibiting antibiotic-resistant Enterobacteriaceae by microbiota-mediated intracellular acidification.
Academic Article Interbacterial mechanisms of colonization resistance and the strategies pathogens use to overcome them.
Academic Article Cellular immunity to intracellular bacteria.
Academic Article Profound alterations of intestinal microbiota following a single dose of clindamycin results in sustained susceptibility to Clostridium difficile-induced colitis.
Academic Article Gut microbiota and tacrolimus dosing in kidney transplantation.
Academic Article Resurrecting the intestinal microbiota to combat antibiotic-resistant pathogens.
Academic Article Short- and long-term effects of oral vancomycin on the human intestinal microbiota.
Academic Article Intestinal microbiota containing Barnesiella species cures vancomycin-resistant Enterococcus faecium colonization.
Academic Article The changing epidemiology of vancomycin-resistant Enterococcus (VRE) bacteremia in allogeneic hematopoietic stem cell transplant (HSCT) recipients.
Academic Article Vancomycin-resistant Enterococcus domination of intestinal microbiota is enabled by antibiotic treatment in mice and precedes bloodstream invasion in humans.
Academic Article Diversification and Evolution of Vancomycin-Resistant Enterococcus faecium during Intestinal Domination.
Academic Article Microbiota-Based Therapies for Clostridium difficile and Antibiotic-Resistant Enteric Infections.
Academic Article Regulation of intestinal inflammation by microbiota following allogeneic bone marrow transplantation.
Academic Article Increased GVHD-related mortality with broad-spectrum antibiotic use after allogeneic hematopoietic stem cell transplantation in human patients and mice.
Academic Article Impact of gut colonization with butyrate-producing microbiota on respiratory viral infection following allo-HCT.
Academic Article Microbiota-derived lantibiotic restores resistance against vancomycin-resistant Enterococcus.
Academic Article Butyrate-producing gut bacteria and viral infections in kidney transplant recipients: A pilot study.
Academic Article Gut uropathogen abundance is a risk factor for development of bacteriuria and urinary tract infection.
Academic Article Impact of Antibiotic-Resistant Bacteria on Immune Activation and Clostridioides difficile Infection in the Mouse Intestine.
Academic Article Antibiotic Degradation by Commensal Microbes Shields Pathogens.
Academic Article Compositional Flux Within the Intestinal Microbiota and Risk for Bloodstream Infection With Gram-negative Bacteria.
Academic Article Outbreaks of Typhlocolitis Caused by Hypervirulent Group ST1 Clostridioides difficile in Highly Immunocompromised Strains of Mice.
Academic Article The microbe-derived short-chain fatty acids butyrate and propionate are associated with protection from chronic GVHD.
Academic Article Cervicovaginal bacterial communities in reproductive-aged Tanzanian women with Schistosoma mansoni, Schistosoma haematobium, or without schistosome infection.
Academic Article Rapid transcriptional and metabolic adaptation of intestinal microbes to host immune activation.
Academic Article TAM mediates adaptation of carbapenem-resistant Klebsiella pneumoniae to antimicrobial stress during host colonization and infection.
Academic Article A MALDI-TOF MS library for rapid identification of human commensal gut bacteria from the class Clostridia.
Concept Carbapenem-Resistant Enterobacteriaceae
Concept Vancomycin-Resistant Enterococci
Grant Innate immune defense against clostridium Difficile Infection
Grant Innate Immune Responses to Microbial Flora
Grant Systems Biology of Microbiome-mediated Resilience to Antibiotic-resistant Pathogens
Grant CYTOTOXIC T LYMPHOCYTE RESPONSE TO BACTERIAL INFECTION
Grant Inflammation and T cell immunity to Listeria
Academic Article Assembling symbiotic bacterial species into live therapeutic consortia that reconstitute microbiome functions.
Academic Article High-resolution analyses of associations between medications, microbiome, and mortality in cancer patients.
Academic Article The TaxUMAP atlas: Efficient display of large clinical microbiome data reveals ecological competition in protection against bacteremia.
Academic Article Corrigendum: A MALDI-TOF MS library for rapid identification of human commensal gut bacteria from the class Clostridia.
Academic Article Bifidobacteria metabolize lactulose to optimize gut metabolites and prevent systemic infection in patients with liver disease.
Academic Article An evolution-based framework for describing human gut bacteria.
Academic Article Dietary- and host-derived metabolites are used by diverse gut bacteria for anaerobic respiration.
Academic Article Activity of Gut-Derived Nisin-like Lantibiotics against Human Gut Pathogens and Commensals.
Search Criteria
  • antibiotic
  • resistant
  • bacteria